BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009D06LP1|AL426024
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1604 1584 0.0
>3x_Contig1604
Length = 15703
Score = 1584 bits (798), Expect = 0.0
Identities = 848/866 (97%)
Strand = Plus / Plus
Query: 6 caccactctctctaagaacatctttttggatatattcaaaatcttagtagagggcgagac 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2135 caccactctctctaagaacatctttttggatatattcaaaatcttagtagagggcgagac 2194
Query: 66 tattgatgatcaaggtcaatcaaattattgggataatcgaattgacttgcaaatggacag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2195 tattgatgatcaaggtcaatcaaattattgggataatcgaattgacttgcaaatggacag 2254
Query: 126 gctttcaaaatatttcaagaaaagacctcctacggtgaagatgattcttttgatacataa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2255 gctttcaaaatatttcaagaaaagacctcctacggtgaagatgattcttttgatacataa 2314
Query: 186 cttggacggtccgtcattccggagagaacattttcaaaccagaatgagtattcttgcaca 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2315 cttggacggtccgtcattccggagagaacattttcaaaccagaatgagtattcttgcaca 2374
Query: 246 aatcaaacaaatctgtgtcgtagcaagtgtcgaccatatacaagctcctttcctttggga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2375 aatcaaacaaatctgtgtcgtagcaagtgtcgaccatatacaagctcctttcctttggga 2434
Query: 306 tcatttcagagctcaatcattcaactttgtttaccacgatatcacaaattttgagccgta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2435 tcatttcagagctcaatcattcaactttgtttaccacgatatcacaaattttgagccgta 2494
Query: 366 catcgtagaaacagtacaaaccgataatgctatcgacttttccaaagattcaggtacctt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2495 catcgtagaaacagtacaaaccgataatgctatcgacttttccaaagattcaggtacctt 2554
Query: 426 gtttaatgcgaacggtgctaaatacgtactagaatccctgacggacaattctaaaagaat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2555 gtttaatgcgaacggtgctaaatacgtactagaatccctgacggacaattctaaaagaat 2614
Query: 486 gtacaaaattcttcttcaacttctaatgggacagattaatgccaagaacgagtcaaagcc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2615 gtacaaaattcttcttcaacttctaatgggacagattaatgccaagaacgagtcaaagcc 2674
Query: 546 tcgtgcaaaatctagttccttaaacaaaatcacacctgggattgagttctctgaactttt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2675 tcgtgcaaaatctagttccttaaacaaaatcacacctgggattgagttctctgaactttt 2734
Query: 606 taaaacatgcaccgaacagttcgtagtctcgagcgaaatgggtcttcgaaccatcctatc 665
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2735 tcaaacatgcaccgaacagttcgtagtctcgagcgaaatgggtcttcgaaccatcctatc 2794
Query: 666 agagttcattgatcataagatggctgtyaatacgaaaaataaaatgggtaaagagatcat 725
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 2795 agagttcattgatcataagatggctgtcaatacgaaaaataaaatgggtaaagagataat 2854
Query: 726 aaatgttaaatatagctatggagacatggaaaaaatgataactgagatagattccatgct 785
|||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2855 aaatgttaaagatagatatggagacatggaaaaaatgataactgagatagattccatgat 2914
Query: 786 gcmataaataatccttatttaaattcaccatacatatttatatttatactctagcgttct 845
| ||||||||| ||||||||||| | || ||||||||||||||||||||||||| |
Sbjct: 2915 gaaataaataataattatttaaattaaaaatcaatatttatatttatactctagcgttat 2974
Query: 846 gatctcatttggctttaccataccgt 871
||| | ||||||||||||||||||||
Sbjct: 2975 gatataatttggctttaccataccgt 3000
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7477
Number of Sequences: 1807
Number of extensions: 7477
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)